PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08353
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 191aa    MW: 20569.1 Da    PI: 11.8495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08353genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1857106255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++ a+++++g
  PEQU_08353  57 LYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 106
                 69****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.91E-2856116No hitNo description
SMARTSM003803.5E-3757120IPR001471AP2/ERF domain
PfamPF008479.4E-1357106IPR001471AP2/ERF domain
PROSITE profilePS5103223.19657114IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-2157115IPR016177DNA-binding domain
PRINTSPR003671.7E-105869IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-3158115IPR001471AP2/ERF domain
PRINTSPR003671.7E-108096IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MSDQGSPSEQ DSSPSSSWPS SSSSSSNPTP TPTPKHSADP NQSGTEKKSR DRIKHTLYRG  60
VRMRSWGKWV SEIRQPRKKS RIWLGTFPTP EMAARAHDVA ALSIKGSAAI LNFPELAASL  120
PRPATLSPHD VQAAAAKAAN MDRARCRKGG QHGPLAAGET LSGFSAISRR ARGDCGAATP  180
QRRQFSRLRR G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1654114463ATERF1
3gcc_A2e-1654114463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047241.14e-51PREDICTED: LOW QUALITY PROTEIN: dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD31e-51DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A059CL441e-51A0A059CL44_EUCGR; Uncharacterized protein
STRINGAT5G11590.13e-49(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-48ERF family protein